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Registro Completo |
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Biblioteca(s): |
Embrapa Agroenergia. |
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Data corrente: |
02/08/2023 |
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Data da última atualização: |
26/10/2023 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
GOMES, T. G.; FONSECA, F. C. de A.; ALVES, G. S. C.; SIQUEIRA, F. G. de; MILLER, R. N. G. |
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Afiliação: |
TAÍSA GODOY GOMES, Universidade de Brasília; FERNANDO CAMPOS DE ASSIS FONSECA, Universidade de Brasília; GABRIEL SERGIO COSTA ALVES, Universidade de Brasília; FELIX GONCALVES DE SIQUEIRA, CNPAE; ROBERT NEIL GERARD MILLER, Universidade de Brasília. |
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Título: |
Development of reference genes for RT-qPCR analysis of gene expression in Pleurotus pulmonarius for biotechnological applications. |
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Ano de publicação: |
2023 |
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Fonte/Imprenta: |
Scientific Reports, v. 13, n. 12296, 2023. |
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DOI: |
https://doi.org/10.1038/s41598-023-39115-4 |
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Idioma: |
Inglês |
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Conteúdo: |
Jatropha curcas is an oilseed crop with biorefinery applications. Whilst cake generated following oil extraction offers potential as a protein source for animal feed, inactivation of toxic phorbol esters present in the material is necessary. Pleurotus pulmonarius is a detoxifying agent for jatropha cake with additional potential as animal feed, edible mushroom and for enzyme production. For the characterization of fungal genes involved in phorbol ester degradation, together with other industrial applications, reverse transcription-quantitative PCR (RT-qPCR) is a tool that enables accurate quantification of gene expression. For this, reliable analysis requires reference genes for normalization of mRNA levels validated under conditions employed for target genes. The stability of potential reference genes ?-TUB, ACTIN, GAPDH, PHOS, EF1?, TRPHO, LAC, MNP3, MYP and VP were evaluated following growth of P. pulmonarius on toxic, non-toxic jatropha cake and a combined treatment, respectively. NormFinder and geNorm algorithms for expression stability analysis identified PHOS, EF1? and MNP3 as appropriate for normalizing gene expression. Reference gene combinations contrasting in ranking were compared following normalization of relative expression of the CHU_2040 gene, encoding an esterase enzyme potentially involved in phorbol ester degradation. The reference genes for P. pulmonarius will facilitate the elucidation of mechanisms involved in detoxification of phorbol esters as well as analysis of target genes for application in biorefinery models. MenosJatropha curcas is an oilseed crop with biorefinery applications. Whilst cake generated following oil extraction offers potential as a protein source for animal feed, inactivation of toxic phorbol esters present in the material is necessary. Pleurotus pulmonarius is a detoxifying agent for jatropha cake with additional potential as animal feed, edible mushroom and for enzyme production. For the characterization of fungal genes involved in phorbol ester degradation, together with other industrial applications, reverse transcription-quantitative PCR (RT-qPCR) is a tool that enables accurate quantification of gene expression. For this, reliable analysis requires reference genes for normalization of mRNA levels validated under conditions employed for target genes. The stability of potential reference genes ?-TUB, ACTIN, GAPDH, PHOS, EF1?, TRPHO, LAC, MNP3, MYP and VP were evaluated following growth of P. pulmonarius on toxic, non-toxic jatropha cake and a combined treatment, respectively. NormFinder and geNorm algorithms for expression stability analysis identified PHOS, EF1? and MNP3 as appropriate for normalizing gene expression. Reference gene combinations contrasting in ranking were compared following normalization of relative expression of the CHU_2040 gene, encoding an esterase enzyme potentially involved in phorbol ester degradation. The reference genes for P. pulmonarius will facilitate the elucidation of mechanisms involved in detoxification of phorbol esters as well as... Mostrar Tudo |
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Thesagro: |
Jatropha Curcas; Refinaria. |
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Thesaurus Nal: |
Oilseed crops. |
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Categoria do assunto: |
-- |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1155580/1/Development-of-reference.pdf
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Marc: |
LEADER 02270naa a2200217 a 4500
001 2155580
005 2023-10-26
008 2023 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.1038/s41598-023-39115-4$2DOI
100 1 $aGOMES, T. G.
245 $aDevelopment of reference genes for RT-qPCR analysis of gene expression in Pleurotus pulmonarius for biotechnological applications.$h[electronic resource]
260 $c2023
520 $aJatropha curcas is an oilseed crop with biorefinery applications. Whilst cake generated following oil extraction offers potential as a protein source for animal feed, inactivation of toxic phorbol esters present in the material is necessary. Pleurotus pulmonarius is a detoxifying agent for jatropha cake with additional potential as animal feed, edible mushroom and for enzyme production. For the characterization of fungal genes involved in phorbol ester degradation, together with other industrial applications, reverse transcription-quantitative PCR (RT-qPCR) is a tool that enables accurate quantification of gene expression. For this, reliable analysis requires reference genes for normalization of mRNA levels validated under conditions employed for target genes. The stability of potential reference genes ?-TUB, ACTIN, GAPDH, PHOS, EF1?, TRPHO, LAC, MNP3, MYP and VP were evaluated following growth of P. pulmonarius on toxic, non-toxic jatropha cake and a combined treatment, respectively. NormFinder and geNorm algorithms for expression stability analysis identified PHOS, EF1? and MNP3 as appropriate for normalizing gene expression. Reference gene combinations contrasting in ranking were compared following normalization of relative expression of the CHU_2040 gene, encoding an esterase enzyme potentially involved in phorbol ester degradation. The reference genes for P. pulmonarius will facilitate the elucidation of mechanisms involved in detoxification of phorbol esters as well as analysis of target genes for application in biorefinery models.
650 $aOilseed crops
650 $aJatropha Curcas
650 $aRefinaria
700 1 $aFONSECA, F. C. de A.
700 1 $aALVES, G. S. C.
700 1 $aSIQUEIRA, F. G. de
700 1 $aMILLER, R. N. G.
773 $tScientific Reports$gv. 13, n. 12296, 2023.
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Registro original: |
Embrapa Agroenergia (CNPAE) |
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| Registros recuperados : 37 | |
| 4. |  | MACHADO, R.; BERGAMASCHI, M. A. C. M.; BARBOSA, R. T.; OLIVIEIRA, C. A.; BINELLI, M. Effects of estradiol-17Beta on ovarian function and preganancy in Nelore cows. In: INTERNATIONAL SYMPOSIUM ON ANIMAL BIOLOGY OF REPRODUCTION, 2., 2008, São Paulo, SO. Absracts... São Paulo: CBRA, 2008. p. 268. p. 228.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 7. | | PUGLIESI, G.; SANTOS, F. B.; LOPES, E.; NOGUEIRA, E.; MAIO, J. R. G.; BINELLI, M. Improved fertility in suckled beef cows ovulating large follicles or supplemented with long-acting progesterone after timed-AI. Theriogenology, n. 85, n. 7, p. 1239-1248, April 2016.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Pantanal. |
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| 16. | | MACHADO, R.; BERGAMASCHI, M. A. C. M.; FIGUEIREDO, R. A.; BARBOSA, R. T.; ANDREO, R.; BERTAN, C. M.; BINELLI, M. Comportamento reprodutivo e função ovariana em vacas de corte Nelore (Bos taurus indicus) após indução da ovulação e tratamento com GnRH e hCG. Acta Scientiae Veterinariae, v. 36, Supl. 2, s451, 2008.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 17. | | PERDIGÃO, A.; ROSSETI, R. C.; NOGUEIRA, G. P.; SÁ FILHO, M.; BINELLI, M.; MACHADO, R.; MEMBRIVE, C. M. B. Effect of fluxinin meglumin, recombinant bovine somatotropin and/or human chorionic gonadotropin in reducing embryo mortality in nelore cows (Bos taurus indicus). In: INTERNATIONAL SYMPOSIUM ANIMAL BIOLOGY OF REPRODUCTIVE, 3., 2010, Águas de São Pedro. Abstracts... São Pedro: CBRA, 2010.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 18. | | ROSSETTI, R. C.; PERDIGÃO, A.; SÁ FILHO, M.; NOGUEIRA, G. P.; MACHADO, R.; MEMBRIVE, C. M. B.; BINELLI, M. Effects of flunixin meglumine, recombinant bovine somatotropin and/or human chorionic gonadotropin on pregnancy rates in Nelore cows. Theriogenology, v. 76, n. 4, p. 751-758, sep. 2011.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 19. | | MACHADO, R.; SUDANO, M. J; BERGAMASCHI, M. A. C. M.; NOGUEIRA, G de P.; MEMBRIVE, C. M. B.; BINELLI, M. Early embryo mortality in beef cows after fixed time artificial insemination (FTAI) and hormanal treatments. In: XXV Reunião Anual da Sociedade Brasileira de Tecnologia de Embriões, 2011, Cumbuco - CE. Acta Scientiae Veterinariae, 2011. v. 39. (Suppl 1), p. 389-389. p.389| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 20. | | MACHADO, R.; SUDANO, M. J.; PASCHOAL, D. M.; NOGUEIRA, G. P.; BERTAN, C. M.; LANDIM-ALVARENGA, F. .C.; BINELLI, M. Hormonal treatment to improve embryo survival in beef cows after fixed time artificial insemination. In: IV International Symposium on Animal Biology of Reproduction (ISABR 2012). Animal Reproduction, v.9, n.4, p.859, 2012.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| Registros recuperados : 37 | |
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| Nenhum registro encontrado para a expressão de busca informada. |
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